Silicimonas algicola str. DSM 103371

star/dumbbell/pleomorphicaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Silicimonas

Description

Silicimonas algicola strain DSM 103371 is a Gram-negative, non-motile bacterium characterized by its unique star or dumbbell shape and pleomorphic form. This microorganism is aerobic, requiring oxygen for growth and metabolic processes. It thrives optimally at a temperature of 25°C, placing it within the mesophilic temperature range, which is typical for many environmental bacteria. The genetic structure of Silicimonas algicola includes a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number QGGV00000000.1, which provides a reference for further genomic studies and comparisons with other microbial species. In terms of ecological significance, the characteristics of Silicimonas algicola suggest its potential role in aquatic ecosystems, particularly in environments where organic matter decomposition and nutrient cycling are essential. The aerobic nature of this bacterium may facilitate the breakdown of organic compounds in oxygen-rich environments, hence contributing to the overall health and balance of its ecological niche. Understanding the traits and behaviors of Silicimonas algicola could provide insights into the microbial dynamics in marine habitats and their influence on nutrient availability and environmental stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusSilicimonas
SpeciesSilicimonas algicola
StrainDSM 103371

Profile

Physiology
Gram staining propertiesGram-negative
Shapestar/dumbbell/pleomorphic
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Silicimonas algicola strain DSM 103371 Ga0215722_129, whole genome

Gene Summary

Adenine Count

750759 bp

Thymine Count

756120 bp

Guanine Count

1425462 bp

Cytosine Count

1405196 bp

Genome Length

4337735 bp

Protein-coding Genes

4319 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxythreonine-4-phosphate dehydrogenaseC8D95_106221Not AvailableNegative2897514 - 289846133097.6
putative neuraminidaseC8D95_106222Not AvailableNegative2898458 - 289960341490.7
eama-like transporter family proteinC8D95_106223Not AvailablePositive2899847 - 290074031610.9
lysr family transcriptional regulatorC8D95_106224Not AvailableNegative2900743 - 290166633608.4
peptide/nickel transport system substrate-binding proteinC8D95_106225Not AvailablePositive2901840 - 290334254975.5
peptide/nickel transport system permease proteinC8D95_106226Not AvailablePositive2903400 - 290431433282.6
peptide/nickel transport system permease proteinC8D95_106227Not AvailablePositive2904319 - 290523633704.4
peptide/nickel transport system atp-binding proteinC8D95_106228Not AvailablePositive2905233 - 290686159676.4
lactate dehydrogenase-like 2-hydroxyacid dehydrogenaseC8D95_106229Not AvailablePositive2906858 - 290782634794.8
ldh2 family malate/lactate/ureidoglycolate dehydrogenaseC8D95_106230Not AvailableNegative2907939 - 290894635122.3

Displaying genes 2921 – 2930 of 4372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.