Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase | C8D95_104315 | Not Available | Negative | 2330815 - 2332071 | 45571.8 |
| homogentisate 1,2-dioxygenase | C8D95_104316 | Not Available | Negative | 2332139 - 2333497 | 50606.0 |
| dna-binding marr family transcriptional regulator | C8D95_104317 | Not Available | Positive | 2333549 - 2333995 | 16772.2 |
| cation diffusion facilitator family transporter | C8D95_104318 | Not Available | Positive | 2334058 - 2334948 | 31866.2 |
| rpir family transcriptional regulator | C8D95_104319 | Not Available | Negative | 2334945 - 2335811 | 32662.3 |
| putative n-formylglutamate amidohydrolase | C8D95_104320 | Not Available | Positive | 2335906 - 2336685 | 27438.6 |
| trap-type mannitol/chloroaromatic compound transport system permease small subunit | C8D95_104321 | Not Available | Positive | 2336682 - 2337218 | 20383.4 |
| tripartite atp-independent transporter dctm subunit | C8D95_104322 | Not Available | Positive | 2337218 - 2338543 | 47923.3 |
| secreted protein | C8D95_104323 | Not Available | Positive | 2338591 - 2339652 | 39515.4 |
| glutamine synthetase | C8D95_104324 | Not Available | Positive | 2339753 - 2341117 | 50414.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
