Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase (nad+) | C8D95_103467 | Not Available | Negative | 1973079 - 1975214 | 76586.1 |
| dna-binding response ompr family regulator | C8D95_103468 | Not Available | Negative | 1975358 - 1976092 | 27535.1 |
| uncharacterized protein duf1153 | C8D95_103469 | Not Available | Negative | 1976184 - 1976462 | 10402.5 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | C8D95_103470 | Not Available | Positive | 1976596 - 1977732 | 40841.6 |
| lipid-a-disaccharide synthase | C8D95_103471 | Not Available | Negative | 1977729 - 1978901 | 41020.3 |
| hypothetical protein | C8D95_103472 | Not Available | Negative | 1978936 - 1979721 | 27500.3 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | C8D95_103473 | Not Available | Negative | 1979723 - 1980523 | 27930.6 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | C8D95_103474 | Not Available | Negative | 1980520 - 1980972 | 16370.2 |
| periplasmic chaperone for outer membrane proteins skp | C8D95_103475 | Not Available | Negative | 1981040 - 1981573 | 19696.2 |
| beta-barrel assembly machine subunit bama | C8D95_103476 | Not Available | Negative | 1981575 - 1983863 | 83576.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
