Desulfuromonas sp. DDH964

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Desulfuromonadales

Family

Desulfuromonadaceae

Genus

Desulfuromonas

Description

Desulfuromonas sp. DDH964 is a microbial species isolated from the underground Soudan iron mine, highlighting its adaptation to extreme subterranean environments. This organism possesses a single replicon, indicating a streamlined genetic structure that may contribute to its metabolic efficiency in its native habitat. The genetic sequence of Desulfuromonas sp. DDH964 can be accessed under the accession number NZ_CP015080.1, which facilitates further research into its genomic characteristics. Desulfuromonas species are known for their ability to reduce sulfur compounds, which plays a significant role in biogeochemical cycles, particularly in anaerobic environments. The presence of Desulfuromonas sp. DDH964 in the iron mine suggests that it may contribute to the cycling of sulfur and iron in such habitats, effectively participating in the mineralization processes that are crucial for maintaining the ecological balance in subterranean ecosystems. The adaptation of Desulfuromonas sp. DDH964 to its unique habitat may provide insights into the microbial diversity and metabolic pathways present in extreme environments. Understanding the role of this species could enhance our knowledge of microbial interactions and ecosystem functioning in similar anaerobic settings, emphasizing the importance of these microorganisms in biogeochemical processes and their potential applications in bioremediation or bioenergy production.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderDesulfuromonadales
FamilyDesulfuromonadaceae
GenusDesulfuromonas
SpeciesDesulfuromonas sp. DDH964
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatunderground Soudan iron mine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfuromonas sp. DDH964 chromosome, complete genome.

Gene Summary

Adenine Count

740912 bp

Thymine Count

741428 bp

Guanine Count

1222938 bp

Cytosine Count

1219374 bp

Genome Length

3924652 bp

Protein-coding Genes

3604 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDBW_RS17485Not AvailableNegative3833963 - 383459823063.7
alpha/beta fold hydrolaseDBW_RS17490Not AvailablePositive3835122 - 383588327506.3
pyridoxal phosphate-dependent aminotransferaseDBW_RS17495Not AvailablePositive3836190 - 383749448385.5
glutamate--cysteine ligaseDBW_RS17500Not AvailablePositive3837579 - 383896150874.9
hypothetical proteinDBW_RS17505Not AvailablePositive3839433 - 383985214987.0
cytochrome c biogenesis protein resbDBW_RS17510Not AvailablePositive3839967 - 384134050507.2
c-type cytochrome biogenesis protein ccsbDBW_RS17515Not AvailablePositive3841373 - 384223031245.5
m3 family oligoendopeptidaseDBW_RS17520Not AvailableNegative3842305 - 384408365875.5
4fe-4s binding proteinDBW_RS17525Not AvailablePositive3844235 - 384522737090.6
hypothetical proteinDBW_RS17530Not AvailableNegative3845308 - 384706262725.6

Displaying genes 3581 – 3590 of 3664 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

234 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 234 metabolites

Health Effects

No health effects information available for this bacterium.