Vibrio sp. HI00D65

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. HI00D65 is characterized by having a single replicon, which indicates a streamlined genomic structure that may influence its adaptability and replication efficiency. The organism is cataloged under the accession number LWEH00000000.1, providing a reference point for genetic and genomic studies. As a member of the Vibrio genus, HI00D65 is likely to share traits common to other Vibrio species, such as the ability to thrive in aquatic environments and potential pathogenicity in marine organisms. The single replicon may suggest a lack of complexity in its genomic architecture, which could be advantageous for survival in fluctuating environmental conditions. Understanding the genomic features of Vibrio sp. HI00D65 can offer insights into its ecological role, particularly in marine ecosystems. Vibrio species are known to interact with various marine life forms, including fish and shellfish, and can play significant roles in nutrient cycling within these habitats. The streamlined genome may facilitate rapid adaptation to changing environmental conditions, thus influencing the dynamics of microbial communities in the ocean. In summary, Vibrio sp. HI00D65 possesses a simple genomic structure with a single replicon, as indicated by its accession number LWEH00000000.1. This trait may reflect its ecological adaptability and potential interactions within marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. HI00D65
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. HI00D65
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. HI00D65 HI00D65_c91, whole genome shotgun sequence.

Gene Summary

Adenine Count

1487311 bp

Thymine Count

1496472 bp

Guanine Count

1170453 bp

Cytosine Count

1164609 bp

Genome Length

5319010 bp

Protein-coding Genes

4361 genes

Non-Coding Genes

310 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA3712_24305Not AvailableNegative3946232 - 39464719038.21
gamma carbonic anhydrase family proteinA3712_22375Not AvailablePositive3946926 - 394747119523.5
transcriptional regulatorA3712_22380Not AvailableNegative3947468 - 394773710074.7
shikimate dehydrogenaseA3712_22385Not AvailableNegative3947754 - 394858429804.4
coproporphyrinogen iii oxidaseA3712_22390Not AvailableNegative3948662 - 394957934814.8
trna threonylcarbamoyladenosine biosynthesis protein rimnA3712_22395Not AvailableNegative3949600 - 395015720260.3
5-(carboxyamino)imidazole ribonucleotide mutaseA3712_22400Not AvailablePositive3950353 - 395083816528.1
5-(carboxyamino)imidazole ribonucleotide synthaseA3712_22405Not AvailablePositive3950844 - 395197441142.4
dna topoisomeraseA3712_22410Not AvailableNegative3952050 - 395261921288.6
hypothetical proteinA3712_22415Not AvailableNegative3952632 - 395310818573.3

Displaying genes 3491 – 3500 of 4671 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.