Vibrio sp. HI00D65

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. HI00D65 is characterized by having a single replicon, which indicates a streamlined genomic structure that may influence its adaptability and replication efficiency. The organism is cataloged under the accession number LWEH00000000.1, providing a reference point for genetic and genomic studies. As a member of the Vibrio genus, HI00D65 is likely to share traits common to other Vibrio species, such as the ability to thrive in aquatic environments and potential pathogenicity in marine organisms. The single replicon may suggest a lack of complexity in its genomic architecture, which could be advantageous for survival in fluctuating environmental conditions. Understanding the genomic features of Vibrio sp. HI00D65 can offer insights into its ecological role, particularly in marine ecosystems. Vibrio species are known to interact with various marine life forms, including fish and shellfish, and can play significant roles in nutrient cycling within these habitats. The streamlined genome may facilitate rapid adaptation to changing environmental conditions, thus influencing the dynamics of microbial communities in the ocean. In summary, Vibrio sp. HI00D65 possesses a simple genomic structure with a single replicon, as indicated by its accession number LWEH00000000.1. This trait may reflect its ecological adaptability and potential interactions within marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. HI00D65
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. HI00D65
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. HI00D65 HI00D65_c91, whole genome shotgun sequence.

Gene Summary

Adenine Count

1487311 bp

Thymine Count

1496472 bp

Guanine Count

1170453 bp

Cytosine Count

1164609 bp

Genome Length

5319010 bp

Protein-coding Genes

4361 genes

Non-Coding Genes

310 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-proNot AvailableNot AvailablePositive2104096 - 2104172Not Available
dna mismatch repair protein mutsA3712_16035Not AvailablePositive2104735 - 210531622469.0
23s rrna pseudouridine synthase fA3712_16040Not AvailablePositive2105485 - 210663042926.9
aminoacyl-trna deacylaseA3712_16045Not AvailableNegative2106708 - 210719317249.9
bifunctional udp-sugar hydrolase/5'-nucleotidaseA3712_16050Not AvailableNegative2107298 - 210895961164.3
3-deoxy-8-phosphooctulonate synthaseA3712_16055Not AvailableNegative2109415 - 211026630910.5
hypothetical proteinA3712_16060Not AvailableNegative2110292 - 211110130959.7
hypothetical proteinA3712_16065Not AvailableNegative2111129 - 211151214151.1
protein-(glutamine-n5) methyltransferase, release factor-specificA3712_16070Not AvailableNegative2111708 - 211258031908.8
peptide chain release factor 1A3712_16075Not AvailableNegative2112586 - 211367440531.6

Displaying genes 1931 – 1940 of 4671 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.