Vibrio sp. HI00D65

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. HI00D65 is characterized by having a single replicon, which indicates a streamlined genomic structure that may influence its adaptability and replication efficiency. The organism is cataloged under the accession number LWEH00000000.1, providing a reference point for genetic and genomic studies. As a member of the Vibrio genus, HI00D65 is likely to share traits common to other Vibrio species, such as the ability to thrive in aquatic environments and potential pathogenicity in marine organisms. The single replicon may suggest a lack of complexity in its genomic architecture, which could be advantageous for survival in fluctuating environmental conditions. Understanding the genomic features of Vibrio sp. HI00D65 can offer insights into its ecological role, particularly in marine ecosystems. Vibrio species are known to interact with various marine life forms, including fish and shellfish, and can play significant roles in nutrient cycling within these habitats. The streamlined genome may facilitate rapid adaptation to changing environmental conditions, thus influencing the dynamics of microbial communities in the ocean. In summary, Vibrio sp. HI00D65 possesses a simple genomic structure with a single replicon, as indicated by its accession number LWEH00000000.1. This trait may reflect its ecological adaptability and potential interactions within marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. HI00D65
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. HI00D65
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. HI00D65 HI00D65_c91, whole genome shotgun sequence.

Gene Summary

Adenine Count

1487311 bp

Thymine Count

1496472 bp

Guanine Count

1170453 bp

Cytosine Count

1164609 bp

Genome Length

5319010 bp

Protein-coding Genes

4361 genes

Non-Coding Genes

310 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exoenzyme s synthesis protein cA3712_12310Not AvailableNegative1243735 - 124418117187.4
type iii secretion system chaperone yscwA3712_12315Not AvailablePositive1244537 - 124494415117.3
transcriptional regulatorA3712_12320Not AvailablePositive1245528 - 124638832812.2
type iii secretion negative regulator (lscz)A3712_12325Not AvailablePositive1246532 - 124751237992.2
type iii secretion system chaperone, yscb familyA3712_12330Not AvailablePositive1247525 - 124795316375.7
escc/yscc/hrcc family type iii secretion system outer membrane ring proteinA3712_12335Not AvailablePositive1247953 - 124982468637.6
escd/yscd/hrpq family type iii secretion system inner membrane ring proteinA3712_12340Not AvailablePositive1249830 - 125113148198.6
esce/ysce/ssae family type iii secretion system needle protein co-chaperoneA3712_12345Not AvailablePositive1251118 - 12513247714.26
escf/yscf/hrpa family type iii secretion system needle major subunitA3712_12350Not AvailablePositive1251341 - 12515899154.79
type iii secretion system proteinA3712_12355Not AvailablePositive1251593 - 125194912886.4

Displaying genes 1171 – 1180 of 4671 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.