Nodularia spumigena CENA596

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nodulariaceae

Genus

Nodularia

Description

Nodularia spumigena CENA596 is a cyanobacterium identified in a shrimp production pond, indicating its adaptability to specific aquatic environments associated with aquaculture. This organism possesses a single replicon, which is characteristic of many cyanobacteria, streamlining its genetic architecture for efficient replication and function. The accession number for this strain is LWAJ00000000.1, which is essential for referencing its genomic data in databases for further research and analysis. The presence of Nodularia spumigena in shrimp production ponds suggests its potential role in the aquatic ecosystem, particularly in nutrient cycling and possibly influencing the overall health of the shrimp population. Its adaptation to such environments may also indicate its ability to thrive in conditions that could be influenced by human activities, such as nutrient loading, which is common in aquaculture settings. Understanding the traits and ecological presence of Nodularia spumigena CENA596 can provide insights into its interactions within the shrimp production ecosystem, as well as its potential impacts on water quality and productivity. Further research on this organism could elucidate its role in the food web and its responses to environmental changes in aquaculture systems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNodulariaceae
GenusNodularia
SpeciesNodularia spumigena
StrainCENA596

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Nodularia spumigena CENA596
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatshrimp production pond
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nodularia spumigena CENA596 scaffold9_cov723, whole genome shotgun

Gene Summary

Adenine Count

1523064 bp

Thymine Count

1528633 bp

Guanine Count

1070713 bp

Cytosine Count

1067268 bp

Genome Length

5189679 bp

Protein-coding Genes

4228 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA2T98_15595Not AvailableNegative3598779 - 359935121840.1
glutamine--fructose-6-phosphate aminotransferaseA2T98_15600O68280Negative3599461 - 360135968914.0
photosystem i iron-sulfur centerA2T98_15605P0A412Negative3601708 - 36019538814.66
hypothetical proteinA2T98_15610Not AvailablePositive3602404 - 360276313721.2
methionyl-trna formyltransferaseA2T98_15615Q3M7E8Negative3602760 - 360376136527.2
hypothetical proteinA2T98_15620Not AvailablePositive3605026 - 360623744204.5
cell division topological specificity factorA2T98_15625B2J2X2Negative3606400 - 360670211794.3
septum site-determining protein mindA2T98_15630O78436Negative3606739 - 360754529296.1
septum site-determining protein mincA2T98_15635Q8YRJ1Negative3607591 - 360862837751.4
hrp-dependent type iii effector proteinA2T98_15640Not AvailableNegative3608702 - 361002747820.3

Displaying genes 2981 – 2990 of 3086 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

192 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 192 metabolites

Health Effects

No health effects information available for this bacterium.