Candidatus Thiodiazotropha endoloripes

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Sedimenticolaceae

Genus

Candidatus Thiodiazotropha

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilySedimenticolaceae
GenusCandidatus Thiodiazotropha
SpeciesCandidatus Thiodiazotropha endoloripes
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Thiodiazotropha endoloripes


Gene Summary

Adenine Count

1075684 bp

Thymine Count

1085881 bp

Guanine Count

1169581 bp

Cytosine Count

1171932 bp

Genome Length

4503078 bp

Protein-coding Genes

3952 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
udp-glucose 4-epimerase galeA3196_00005Q59083+1469 - 246735961.5
undecaprenyl-diphosphataseA3196_00010A4VNS0+2531 - 333129095.3
hypothetical proteinA3196_00015Not Available+3559 - 405618809.2
acyltransferaseA3196_00020Not Available-4211 - 592665627.7
methionine--trna ligaseA3196_00025Q3JCG5+6142 - 819076573.6
hypothetical proteinA3196_00030Not Available-8365 - 983450704.6
cold-shock proteinA3196_00035P95459-10374 - 105837680.04
hypothetical proteinA3196_00040Not Available-10853 - 1116111296.2
hypothetical proteinA3196_00045Not Available-11355 - 1186419026.8
hypothetical proteinA3196_00050Not Available-11929 - 1235716553.4

Displaying genes 1 – 10 of 4005 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

173 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 173 metabolites