Nitrosococcus wardiae str. D1FHS

Gram-negativeCocci

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Nitrosococcus

Description

Nitrosococcus wardiae strain D1FHS is a Gram-negative bacterium characterized by its cocci shape. This organism possesses flagella, indicating the potential for motility. A notable genomic feature of Nitrosococcus wardiae D1FHS is the presence of a single replicon, which is significant for understanding its genetic structure and replication process. The accession number for this strain is NZ_CP038033.1, which provides a reference for its genomic data in biological databases. This strain contributes to the broader understanding of the Nitrosococcus genus, known for its role in the nitrogen cycle, particularly in ammonia oxidation. The ecological role of Nitrosococcus wardiae D1FHS can be linked to its involvement in nitrification processes, which are essential for maintaining nitrogen balance in various ecosystems. By converting ammonia to nitrite, these bacteria play a crucial role in soil fertility and aquatic systems, influencing nutrient availability and supporting plant growth. The motility conferred by flagella may also enhance its ability to colonize different environments, thereby optimizing its ecological function. Overall, the traits of Nitrosococcus wardiae D1FHS highlight its significance in microbial ecology and its potential contributions to biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusNitrosococcus
SpeciesNitrosococcus wardiae
StrainD1FHS

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Nitrosococcus wardiae str. D1FHS
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosococcus wardiae strain D1FHS chromosome, complete genome.

Gene Summary

Adenine Count

990521 bp

Thymine Count

994459 bp

Guanine Count

1019918 bp

Cytosine Count

1017742 bp

Genome Length

4022640 bp

Protein-coding Genes

3780 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative terminase large subunitE3U44_RS19860Not AvailablePositive1093478 - 109394517057.4
Putative terminase large subunitE3U44_RS20305Not AvailablePositive1093881 - 10940637240.45
hypothetical proteinE3U44_RS05345Not AvailablePositive1094225 - 10944076515.73
Hypothetical ptoteinE3U44_RS05350Not AvailablePositive1094621 - 109507017183.0
hypothetical proteinE3U44_RS05355Not AvailablePositive1095114 - 10953779874.95
type ii toxin-antitoxin system hicb family antitoxinE3U44_RS05365Not AvailablePositive1095487 - 10956606177.43
duf6290 family proteinE3U44_RS05370Not AvailablePositive1095848 - 10960738145.88
ToxinE3U44_RS05375Not AvailablePositive1096133 - 10963187009.53
AttrNot AvailableNot AvailablePositive1100372 - 1100385Not Available
Putative transposaseE3U44_RS19625Not AvailableNegative2201847 - 220253926870.3

Displaying genes 11 – 20 of 3860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.