Oceanihabitans sediminis str. S9-10

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Oceanihabitans

Description

Oceanihabitans sediminis strain S9-10 is a Gram-negative, aerobic bacterium characterized by its rod shape and motility. This organism presents a unique profile within its genus, primarily due to its specific growth requirements and cellular structure. As a Gram-negative bacterium, Oceanihabitans sediminis S9-10 exhibits a distinctive cell wall structure, which is typical of this classification. The presence of a single replicon indicates a streamlined genetic organization, which may contribute to its adaptability in marine environments. The strain's motility suggests that it is capable of movement, likely aiding in its survival and colonization in sedimentary habitats where it can thrive. The aerobic nature of this bacterium indicates that it requires oxygen for its metabolic processes, positioning it as a potential player in biogeochemical cycles within marine ecosystems. Its ability to utilize oxygen can influence nutrient dynamics and interactions with other microbial communities in the sediments where it is found. In summary, Oceanihabitans sediminis S9-10 is a motile, rod-shaped, Gram-negative bacterium that thrives in aerobic conditions and possesses a single replicon. Its ecological role may involve contributing to nutrient cycling in marine sediments, demonstrating the importance of such microorganisms in maintaining the health and balance of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusOceanihabitans
SpeciesOceanihabitans sediminis
StrainS9-10

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanihabitans sediminis strain S9-10 contig20_1, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2329 genes

Non-Coding Genes

318 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron abc transporter permeaseDU428_08730Not AvailablePositive1923086 - 192410236159.9
abc transporter atp-binding proteinDU428_08735Not AvailablePositive1924102 - 192489629372.0
dna recombination protein rmucDU428_08740Not AvailablePositive1925166 - 192655153286.8
6-phosphogluconate dehydrogenaseDU428_08745Not AvailablePositive1926564 - 192692914284.3
acyl-coa thioesteraseDU428_08750Not AvailablePositive1926930 - 192748420728.6
carbamoyl-phosphate synthase large subunitDU428_08755Not AvailableNegative1927563 - 1930415106293.0
50s ribosomal protein l34DU428_08760Not AvailableNegative1930516 - 19306776289.82
duf2892 domain-containing proteinDU428_08765Not AvailablePositive1930866 - 193144422257.7
lytic transglycosylase domain-containing proteinDU428_08770Not AvailableNegative1931500 - 193242635198.2
alpha/beta hydrolaseDU428_08775Not AvailableNegative1932481 - 193314325647.8

Displaying genes 1741 – 1750 of 2647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.