Oceanihabitans sediminis str. S9-10

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Oceanihabitans

Description

Oceanihabitans sediminis strain S9-10 is a Gram-negative, aerobic bacterium characterized by its rod shape and motility. This organism presents a unique profile within its genus, primarily due to its specific growth requirements and cellular structure. As a Gram-negative bacterium, Oceanihabitans sediminis S9-10 exhibits a distinctive cell wall structure, which is typical of this classification. The presence of a single replicon indicates a streamlined genetic organization, which may contribute to its adaptability in marine environments. The strain's motility suggests that it is capable of movement, likely aiding in its survival and colonization in sedimentary habitats where it can thrive. The aerobic nature of this bacterium indicates that it requires oxygen for its metabolic processes, positioning it as a potential player in biogeochemical cycles within marine ecosystems. Its ability to utilize oxygen can influence nutrient dynamics and interactions with other microbial communities in the sediments where it is found. In summary, Oceanihabitans sediminis S9-10 is a motile, rod-shaped, Gram-negative bacterium that thrives in aerobic conditions and possesses a single replicon. Its ecological role may involve contributing to nutrient cycling in marine sediments, demonstrating the importance of such microorganisms in maintaining the health and balance of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusOceanihabitans
SpeciesOceanihabitans sediminis
StrainS9-10

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanihabitans sediminis strain S9-10 contig20_1, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2329 genes

Non-Coding Genes

318 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase subunit sigma-70DU428_05305Not AvailableNegative1178569 - 117912021757.0
glycosyltransferaseDU428_05310Not AvailableNegative1179111 - 118022342678.4
membrane or secreted proteinDU428_05315Not AvailableNegative1180230 - 11804337141.77
rna polymerase subunit sigma-70DU428_05320Not AvailableNegative1180545 - 118133629581.3
rna polymerase sigma factorDU428_05325Not AvailableNegative1181333 - 118187820972.4
udp-n-acetylmuramate dehydrogenaseDU428_05330Not AvailableNegative1181943 - 118295637526.1
pyridoxal phosphate-dependent aminotransferaseDU428_05335Not AvailableNegative1182956 - 118414644177.4
pdz domain-containing proteinDU428_05340Not AvailablePositive1184267 - 118560750829.6
duf1573 domain-containing proteinDU428_05345Not AvailableNegative1185666 - 118609115485.0
valine--trna ligaseDU428_05350Not AvailablePositive1186342 - 1188975100354.0

Displaying genes 1061 – 1070 of 2647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.