Syntrophus sp. PtaB.Bin138

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophia

Order

Syntrophales

Family

Syntrophaceae

Genus

Syntrophus

Description

Syntrophus sp. PtaB.Bin138 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species possesses a single replicon, indicating a streamlined genomic structure that may play a role in its metabolic efficiency. The genomic data for this organism is cataloged under the accession number MVQU00000000.1. As a member of the Syntrophus genus, Syntrophus sp. PtaB.Bin138 is likely involved in syntrophic interactions, where it may contribute to the degradation of organic compounds in anaerobic environments. This metabolic behavior is crucial in ecological contexts, particularly in nutrient cycling and the breakdown of complex organic materials, which can influence the dynamics of microbial communities in various habitats, such as wetlands, sediments, and anaerobic digesters. The traits of Syntrophus sp. PtaB.Bin138 suggest its potential role in biogeochemical processes, emphasizing the importance of such microorganisms in maintaining ecosystem health and stability. Its flagellated, motile nature may enhance its ability to interact with other microbes and substrates, further integrating it within its ecological niche. Understanding the specific functions and interactions of Syntrophus sp. PtaB.Bin138 can provide insights into the broader implications of syntrophic bacteria in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassSyntrophia
OrderSyntrophales
FamilySyntrophaceae
GenusSyntrophus
SpeciesSyntrophus sp. PtaB.Bin138
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Syntrophus sp. PtaB.Bin138
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Syntrophus sp. PtaB.Bin138 A4E69_contig000204, whole genome

Gene Summary

Adenine Count

804730 bp

Thymine Count

814530 bp

Guanine Count

997845 bp

Cytosine Count

992333 bp

Genome Length

3609438 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA4E69_00001Not AvailablePositive55 - 2015588.8
tyrosine recombinase xerdA4E69_00002Not AvailableNegative356 - 103925605.1
thioredoxin-1A4E69_00003Not AvailableNegative1426 - 198620644.2
putative a/g-specific adenine glycosylase yfhqA4E69_00004Not AvailableNegative2117 - 272221980.8
putative glycosyltransferase epsdA4E69_00005Not AvailablePositive2913 - 346120075.1
hypothetical proteinA4E69_00006Not AvailablePositive4361 - 526632442.6
hypothetical proteinA4E69_00007Not AvailablePositive5838 - 697440427.3
molybdopterin molybdenumtransferaseA4E69_00008Not AvailableNegative7114 - 907270512.7
hypothetical proteinA4E69_00009Not AvailableNegative9103 - 939910891.3
calcium-transporting atpase 1A4E69_00010Not AvailablePositive9546 - 1211691995.5

Displaying genes 1 – 10 of 3426 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.