Methanobacterium sp. PtaB.Bin024

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanobacterium

Description

Methanobacterium sp. PtaB.Bin024 is a species of methanogenic archaea characterized by the presence of flagella, which suggests a potential for motility in its aquatic environment. This organism is noted for having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptability in its ecological niche. The genome of Methanobacterium sp. PtaB.Bin024 is accessible through the accession number MVPY00000000.1, allowing for further study and exploration of its genetic characteristics and metabolic pathways. The presence of flagella in Methanobacterium sp. PtaB.Bin024 may provide advantages in seeking optimal environments for growth and survival, such as areas with higher concentrations of organic substrates or specific environmental conditions conducive to methanogenesis. This motility could also play a role in the organism's interactions with other microbial communities, potentially influencing local biogeochemical cycles, particularly those involving methane production. Methanogens like Methanobacterium species are crucial in anaerobic environments, such as wetlands and the digestive tracts of ruminants, where they contribute to the breakdown of organic matter and the production of methane as a metabolic byproduct. In summary, the traits of Methanobacterium sp. PtaB.Bin024, particularly its motility and genomic structure, highlight its role in anaerobic ecosystems and its potential influence on methane dynamics within its habitat.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanobacteria
OrderMethanobacteriales
FamilyMethanobacteriaceae
GenusMethanobacterium
SpeciesMethanobacterium sp. PtaB.Bin024
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Methanobacterium sp. PtaB.Bin024 A4E25_contig000102, whole

Gene Summary

Adenine Count

775122 bp

Thymine Count

767166 bp

Guanine Count

476110 bp

Cytosine Count

471486 bp

Genome Length

2489884 bp

Protein-coding Genes

2454 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zc3h12a-like ribonuclease nyn domain proteinA4E25_01260Not AvailablePositive1190643 - 119171640453.6
hypothetical proteinA4E25_01261Not AvailablePositive1191717 - 119292545265.6
hypothetical proteinA4E25_01262Not AvailablePositive1193069 - 119339211390.8
glutamate n-acetyltransferaseA4E25_01263Not AvailablePositive1193617 - 119481042195.2
dtdp-4-dehydrorhamnose reductaseA4E25_01264Not AvailablePositive1194913 - 119574931331.1
ll-diaminopimelate aminotransferaseA4E25_01265Not AvailableNegative1195837 - 119707246083.3
imidazole glycerol phosphate synthase subunit hisfA4E25_01266Not AvailableNegative1197427 - 119814325445.9
trna pseudouridine synthase aA4E25_01267Not AvailablePositive1198456 - 119926531144.0
hypothetical proteinA4E25_01268Not AvailablePositive1199554 - 120093352744.8
udp-n-acetylglucosamine 2-epimeraseA4E25_01269Not AvailablePositive1201148 - 120245248724.9

Displaying genes 1271 – 1280 of 2497 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.