Sphingorhabdus sp. M41

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus sp. M41 is characterized by having a single replicon, which suggests a streamlined genomic organization. The organism is cataloged under the accession number NZ_CP014545.1, indicating its presence in genomic databases. Sphingorhabdus sp. belongs to a genus that is typically associated with various environments, often contributing to the degradation of complex organic compounds. While specific ecological roles of Sphingorhabdus sp. M41 are not detailed, members of the Sphingorhabdus genus are known for their potential in bioremediation processes and organic matter decomposition. The presence of a single replicon may confer certain advantages to Sphingorhabdus sp. M41, including a simplified replication process and potentially a faster response to environmental changes. This trait can be advantageous in various ecological contexts, allowing for efficient adaptation and survival in diverse habitats. In summary, Sphingorhabdus sp. M41, with its single replicon and its classification under the accession NZ_CP014545.1, exemplifies traits that may support its ecological roles, particularly in organic matter breakdown and bioremediation efforts. Further studies would be beneficial to clarify its specific functions and contributions to its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus sp. M41
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus sp. M41 chromosome, complete genome.

Gene Summary

Adenine Count

725557 bp

Thymine Count

719814 bp

Guanine Count

947308 bp

Cytosine Count

946842 bp

Genome Length

3339521 bp

Protein-coding Genes

3134 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAZE99_RS03065Not AvailablePositive624996 - 62542714955.9
hypothetical proteinAZE99_RS03070Not AvailableNegative625431 - 62631231301.2
fimbria/pilus outer membrane usher proteinAZE99_RS03075Not AvailableNegative626322 - 62875488495.2
molecular chaperoneAZE99_RS03080Not AvailableNegative628818 - 62955226745.2
spore coat protein u domain-containing proteinAZE99_RS03085Not AvailableNegative629702 - 63025619702.1
response regulator transcription factorAZE99_RS03090Not AvailablePositive631370 - 63176214239.5
yaio family outer membrane beta-barrel proteinAZE99_RS03095Not AvailablePositive631755 - 63286739810.9
heat repeat domain-containing proteinAZE99_RS03100Not AvailablePositive632864 - 63385336989.4
glycosyltransferaseAZE99_RS03105Not AvailablePositive633850 - 63528352867.7
tonb-system energizer exbbAZE99_RS03110Not AvailablePositive635589 - 63636227115.4

Displaying genes 641 – 650 of 3203 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.