Sphingorhabdus sp. M41

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus sp. M41 is characterized by having a single replicon, which suggests a streamlined genomic organization. The organism is cataloged under the accession number NZ_CP014545.1, indicating its presence in genomic databases. Sphingorhabdus sp. belongs to a genus that is typically associated with various environments, often contributing to the degradation of complex organic compounds. While specific ecological roles of Sphingorhabdus sp. M41 are not detailed, members of the Sphingorhabdus genus are known for their potential in bioremediation processes and organic matter decomposition. The presence of a single replicon may confer certain advantages to Sphingorhabdus sp. M41, including a simplified replication process and potentially a faster response to environmental changes. This trait can be advantageous in various ecological contexts, allowing for efficient adaptation and survival in diverse habitats. In summary, Sphingorhabdus sp. M41, with its single replicon and its classification under the accession NZ_CP014545.1, exemplifies traits that may support its ecological roles, particularly in organic matter breakdown and bioremediation efforts. Further studies would be beneficial to clarify its specific functions and contributions to its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus sp. M41
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus sp. M41 chromosome, complete genome.

Gene Summary

Adenine Count

725557 bp

Thymine Count

719814 bp

Guanine Count

947308 bp

Cytosine Count

946842 bp

Genome Length

3339521 bp

Protein-coding Genes

3134 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonuclease iiiAZE99_RS02310Not AvailablePositive468444 - 46914525945.1
endonuclease iiiAZE99_RS02315Not AvailablePositive469142 - 46981024842.7
arsc family reductaseAZE99_RS02320Not AvailablePositive469803 - 47017113968.9
duf427 domain-containing proteinAZE99_RS02325Not AvailablePositive470366 - 47064710360.9
glycerophosphodiester phosphodiesteraseAZE99_RS02330Not AvailablePositive470743 - 47173835884.4
tcr/tet family mfs transporterAZE99_RS02335Not AvailableNegative471714 - 47294643837.0
3-methyl-2-oxobutanoate hydroxymethyltransferaseAZE99_RS02340Not AvailablePositive473087 - 47395930931.3
tetratricopeptide repeat proteinAZE99_RS02345Not AvailablePositive474116 - 47488627909.9
pqq-binding-like beta-propeller repeat proteinAZE99_RS02350Not AvailablePositive474883 - 47621746135.8
ribosome biogenesis gtpase derAZE99_RS02355Not AvailablePositive476249 - 47764050852.1

Displaying genes 491 – 500 of 3203 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.