Sphingorhabdus sp. M41

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus sp. M41 is characterized by having a single replicon, which suggests a streamlined genomic organization. The organism is cataloged under the accession number NZ_CP014545.1, indicating its presence in genomic databases. Sphingorhabdus sp. belongs to a genus that is typically associated with various environments, often contributing to the degradation of complex organic compounds. While specific ecological roles of Sphingorhabdus sp. M41 are not detailed, members of the Sphingorhabdus genus are known for their potential in bioremediation processes and organic matter decomposition. The presence of a single replicon may confer certain advantages to Sphingorhabdus sp. M41, including a simplified replication process and potentially a faster response to environmental changes. This trait can be advantageous in various ecological contexts, allowing for efficient adaptation and survival in diverse habitats. In summary, Sphingorhabdus sp. M41, with its single replicon and its classification under the accession NZ_CP014545.1, exemplifies traits that may support its ecological roles, particularly in organic matter breakdown and bioremediation efforts. Further studies would be beneficial to clarify its specific functions and contributions to its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus sp. M41
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus sp. M41 chromosome, complete genome.

Gene Summary

Adenine Count

725557 bp

Thymine Count

719814 bp

Guanine Count

947308 bp

Cytosine Count

946842 bp

Genome Length

3339521 bp

Protein-coding Genes

3134 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
orotidine-5'-phosphate decarboxylaseAZE99_RS05740Not AvailableNegative1191275 - 119194923687.6
lapa family proteinAZE99_RS05745Not AvailableNegative1191946 - 119229012449.4
adenylosuccinate lyaseAZE99_RS05750Not AvailableNegative1192376 - 119367748574.3
6-phosphofructokinaseAZE99_RS05755Not AvailablePositive1193791 - 119489139829.7
radc family proteinAZE99_RS05760Not AvailableNegative1194907 - 119561125725.2
ydbh domain-containing proteinAZE99_RS05765Not AvailablePositive1195761 - 1198904111141.0
ynbe family lipoproteinAZE99_RS05770Not AvailablePositive1198927 - 11991728986.04
ydbl family proteinAZE99_RS05775Not AvailablePositive1199253 - 119956711333.2
mechanosensitive ion channel family proteinAZE99_RS16270Not AvailableNegative1199605 - 120099950948.9
zinc transporter zntbAZE99_RS05785Not AvailableNegative1201004 - 120202037928.9

Displaying genes 1181 – 1190 of 3203 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.