Pseudomonas sp. ERMR1:02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. ERMR1:02 is characterized by a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The organism is identified by the accession number NKJI00000000.1, which serves as a reference for genomic and taxonomic studies. As a member of the Pseudomonas genus, this strain likely possesses traits commonly associated with Pseudomonas species, such as metabolic versatility and the ability to thrive in diverse ecological niches. This versatility often includes the ability to degrade various organic compounds, which can play a significant role in bioremediation efforts and nutrient cycling in ecosystems. The streamlined genomic structure, along with the metabolic capabilities typically found in Pseudomonas species, suggests that Pseudomonas sp. ERMR1:02 may efficiently adapt to changing environmental conditions. This adaptability can be critical for survival in fluctuating habitats, such as soil or aquatic environments where nutrient availability and competition with other microorganisms can vary significantly. In summary, the single replicon of Pseudomonas sp. ERMR1:02, along with its potential metabolic versatility, highlights its ecological importance and adaptability. Understanding these traits can provide insights into its role in nutrient cycling and bioremediation processes, further emphasizing the significance of Pseudomonas species in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. ERMR1:02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. ERMR1:02
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. ERMR1:02 unitig_41, whole genome shotgun sequence.

Gene Summary

Adenine Count

1393404 bp

Thymine Count

1406655 bp

Guanine Count

1986916 bp

Cytosine Count

1943294 bp

Genome Length

6730269 bp

Protein-coding Genes

5047 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription-repair coupling factorCES87_17300Not AvailableNegative3724215 - 3727664128770.0
type i glyceraldehyde-3-phosphate dehydrogenaseCES87_17305Not AvailablePositive3728027 - 372949052987.6
group ii intron reverse transcriptase/maturaseCES87_17315Not AvailablePositive3729990 - 373128249263.4
citrate-proton symporterCES87_17320Not AvailableNegative3731516 - 373281746401.5
thiamine biosynthesis protein apbeCES87_17325Not AvailablePositive3733142 - 373417037133.9
nad(p)(+) transhydrogenase (si-specific)CES87_17330Not AvailablePositive3734378 - 373577250803.6
glycerophosphodiester phosphodiesteraseCES87_17335Not AvailableNegative3735815 - 373653726734.2
pilus assembly protein pilzCES87_17340Not AvailableNegative3736552 - 373713321792.1
lipoprotein-releasing system transmembrane subunit lolcCES87_17345Not AvailablePositive3737228 - 373847845506.1
lipoprotein-releasing system atp-binding protein loldCES87_17350Not AvailablePositive3738485 - 373916824704.1

Displaying genes 3041 – 3050 of 5184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.