Pseudomonas sp. ERMR1:02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. ERMR1:02 is characterized by a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The organism is identified by the accession number NKJI00000000.1, which serves as a reference for genomic and taxonomic studies. As a member of the Pseudomonas genus, this strain likely possesses traits commonly associated with Pseudomonas species, such as metabolic versatility and the ability to thrive in diverse ecological niches. This versatility often includes the ability to degrade various organic compounds, which can play a significant role in bioremediation efforts and nutrient cycling in ecosystems. The streamlined genomic structure, along with the metabolic capabilities typically found in Pseudomonas species, suggests that Pseudomonas sp. ERMR1:02 may efficiently adapt to changing environmental conditions. This adaptability can be critical for survival in fluctuating habitats, such as soil or aquatic environments where nutrient availability and competition with other microorganisms can vary significantly. In summary, the single replicon of Pseudomonas sp. ERMR1:02, along with its potential metabolic versatility, highlights its ecological importance and adaptability. Understanding these traits can provide insights into its role in nutrient cycling and bioremediation processes, further emphasizing the significance of Pseudomonas species in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. ERMR1:02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. ERMR1:02
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. ERMR1:02 unitig_41, whole genome shotgun sequence.

Gene Summary

Adenine Count

1393404 bp

Thymine Count

1406655 bp

Guanine Count

1986916 bp

Cytosine Count

1943294 bp

Genome Length

6730269 bp

Protein-coding Genes

5047 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa dehydrogenaseCES87_12150Not AvailableNegative2569319 - 257112166314.2
trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenaseCES87_12155Not AvailableNegative2571374 - 2575327142469.0
type iv secretion protein rhsCES87_12160Not AvailablePositive2575818 - 257769569985.0
hypothetical proteinCES87_12165Not AvailablePositive2577685 - 257842227439.8
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjCES87_12170Not AvailablePositive2578714 - 257955031673.3
peptide-methionine (s)-s-oxide reductaseCES87_12175Not AvailableNegative2579650 - 258030024112.6
diguanylate cyclaseCES87_12180Not AvailableNegative2580475 - 2583168100546.0
phosphodiesteraseCES87_12185Not AvailableNegative2583437 - 258483153585.3
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferaseCES87_12190Not AvailableNegative2585102 - 258705765984.8
glucosyltransferase i rfagCES87_12215Not AvailablePositive2595294 - 259641542095.7

Displaying genes 2181 – 2190 of 5184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.