Pseudomonas sp. ERMR1:02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. ERMR1:02 is characterized by a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The organism is identified by the accession number NKJI00000000.1, which serves as a reference for genomic and taxonomic studies. As a member of the Pseudomonas genus, this strain likely possesses traits commonly associated with Pseudomonas species, such as metabolic versatility and the ability to thrive in diverse ecological niches. This versatility often includes the ability to degrade various organic compounds, which can play a significant role in bioremediation efforts and nutrient cycling in ecosystems. The streamlined genomic structure, along with the metabolic capabilities typically found in Pseudomonas species, suggests that Pseudomonas sp. ERMR1:02 may efficiently adapt to changing environmental conditions. This adaptability can be critical for survival in fluctuating habitats, such as soil or aquatic environments where nutrient availability and competition with other microorganisms can vary significantly. In summary, the single replicon of Pseudomonas sp. ERMR1:02, along with its potential metabolic versatility, highlights its ecological importance and adaptability. Understanding these traits can provide insights into its role in nutrient cycling and bioremediation processes, further emphasizing the significance of Pseudomonas species in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. ERMR1:02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. ERMR1:02
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. ERMR1:02 unitig_41, whole genome shotgun sequence.

Gene Summary

Adenine Count

1393404 bp

Thymine Count

1406655 bp

Guanine Count

1986916 bp

Cytosine Count

1943294 bp

Genome Length

6730269 bp

Protein-coding Genes

5047 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-flavin reductaseCES87_00435Not AvailablePositive85986 - 8664823604.4
lysr family transcriptional regulatorCES87_00440Not AvailableNegative86645 - 8759535312.7
choline-sulfataseCES87_00445Not AvailablePositive87710 - 8922457234.9
glycine/betaine abc transporter substrate-binding proteinCES87_00450Not AvailablePositive89241 - 9016133289.9
sodium-independent anion transporterCES87_00455Not AvailablePositive90304 - 9187256568.4
shikimate dehydrogenaseCES87_00460Not AvailableNegative91979 - 9280029076.7
coproporphyrinogen iii oxidaseCES87_00465Not AvailableNegative92814 - 9372834593.4
5s ribosomal rnaNot AvailableNot AvailablePositive94639 - 94754Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive94876 - 97791Not Available
trna threonylcarbamoyladenosine biosynthesis protein rimnCES87_00475Not AvailableNegative94982 - 9553920567.8

Displaying genes 141 – 150 of 5184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.