Thaumarchaeota archaeon 13_1_40CM_3_38_6

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Order

Family

Genus

Description

Thaumarchaeota archaeon 13_1_40CM_3_38_6 is characterized by possessing a single replicon and is cataloged under the accession number MNFZ00000000.1. This organism belongs to the phylum Thaumarchaeota, which is notable for its role in biogeochemical processes, particularly in nitrogen cycling through ammonia oxidation. The presence of only one replicon indicates a streamlined genomic structure, which is often associated with efficient replication and adaptation to specific ecological niches. Thaumarchaeota are known to thrive in various environments, including marine and terrestrial ecosystems, where they contribute significantly to the microbial community dynamics. The ecological significance of Thaumarchaeota, including strains like 13_1_40CM_3_38_6, lies in their ability to oxidize ammonia, a process that is crucial for nutrient cycling in aquatic systems. This metabolic capability positions them as key players in the maintenance of ecosystem health and function, particularly in environments where nitrogen is a limiting nutrient. Their activities can impact primary productivity and overall biodiversity, highlighting their importance in both natural and anthropogenically influenced ecosystems. Understanding the traits of Thaumarchaeota, such as those exhibited by archaeon 13_1_40CM_3_38_6, contributes to our knowledge of microbial ecology and the intricate relationships within microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thaumarchaeota archaeon 13_1_40CM_3_38_6


Gene Summary

Adenine Count

449416 bp

Thymine Count

450696 bp

Guanine Count

276037 bp

Cytosine Count

274061 bp

Genome Length

1451029 bp

Protein-coding Genes

1560 genes

Non-Coding Genes

27 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylmalonyl-coa epimeraseAUI92_00350Not AvailableNegative66872 - 6726714659.7
methylmalonyl-coa mutaseAUI92_00355Not AvailableNegative67269 - 6884059060.8
protein kinaseAUI92_00360Not AvailableNegative68845 - 6975932979.1
methylmalonyl-coa mutaseAUI92_00365Not AvailablePositive69894 - 7031314999.4
ketol-acid reductoisomeraseAUI92_00370Not AvailableNegative70315 - 7131336953.6
queuine/archaeosine trna-ribosyltransferaseAUI92_00375Not AvailableNegative71375 - 7288557702.5
shikimate kinaseAUI92_00380Not AvailableNegative72920 - 7347120989.0
redox-regulated atpase ychfAUI92_00385Not AvailablePositive73545 - 7473843719.9
o-sialoglycoprotein endopeptidaseAUI92_00390Not AvailablePositive74740 - 7572335610.4
hypothetical proteinAUI92_00395Not AvailableNegative75720 - 7604012056.7

Displaying genes 71 – 80 of 1587 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.