Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis albispora |
| Strain | WP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333167 bp
Thymine Count
1339502 bp
Guanine Count
3223150 bp
Cytosine Count
3225624 bp
Genome Length
9121443 bp
Protein-coding Genes
8450 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | A4R43_RS04730 | Not Available | Positive | 962618 - 963805 | 41819.0 |
| shikimate kinase | A4R43_RS04735 | Not Available | Positive | 963802 - 964347 | 18862.5 |
| 3-dehydroquinate synthase | A4R43_RS04740 | Not Available | Positive | 964347 - 965453 | 38765.8 |
| type ii 3-dehydroquinate dehydratase | A4R43_RS04745 | Not Available | Positive | 965450 - 965881 | 15443.3 |
| gnat family n-acetyltransferase | A4R43_RS04750 | Not Available | Positive | 965912 - 966826 | 33805.0 |
| beta-xylosidase | A4R43_RS04755 | Not Available | Positive | 966912 - 968447 | 53023.9 |
| b-4dmt family transporter | A4R43_RS04760 | Not Available | Negative | 968420 - 968920 | 17498.4 |
| m24 family metallopeptidase | A4R43_RS04765 | Not Available | Positive | 968948 - 970045 | 39151.5 |
| elongation factor p | A4R43_RS04770 | Not Available | Positive | 970086 - 970649 | 20396.1 |
| transcription antitermination factor nusb | A4R43_RS04775 | Not Available | Positive | 970646 - 971098 | 16155.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
