Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis albispora |
| Strain | WP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333167 bp
Thymine Count
1339502 bp
Guanine Count
3223150 bp
Cytosine Count
3225624 bp
Genome Length
9121443 bp
Protein-coding Genes
8450 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | A4R43_RS19405 | Not Available | Positive | 4173838 - 4174620 | 27881.8 |
| 5-dehydro-2-deoxygluconokinase | A4R43_RS19410 | Not Available | Positive | 4174791 - 4175714 | 32368.8 |
| aldolase | A4R43_RS19415 | Not Available | Positive | 4175711 - 4176601 | 31192.4 |
| 5-deoxy-glucuronate isomerase | A4R43_RS19420 | Not Available | Positive | 4176598 - 4177467 | 31398.7 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | A4R43_RS19425 | Not Available | Positive | 4177464 - 4179287 | 64196.7 |
| ycii family protein | A4R43_RS19435 | Not Available | Negative | 4179679 - 4180002 | 11640.9 |
| nad(p)-binding domain-containing protein | A4R43_RS19440 | Not Available | Negative | 4180012 - 4181073 | 38382.7 |
| srpbcc family protein | A4R43_RS19445 | Not Available | Negative | 4181127 - 4181996 | 29769.1 |
| fad binding domain-containing protein | A4R43_RS19450 | Not Available | Negative | 4182023 - 4182877 | 29692.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | A4R43_RS19455 | Not Available | Negative | 4182874 - 4185312 | 86781.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
