Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | C1H87_RS04730 | Not Available | Positive | 1166207 - 1167595 | 54256.6 |
| duf368 domain-containing protein | C1H87_RS04735 | Not Available | Positive | 1167732 - 1168652 | 33707.2 |
| duf368 domain-containing protein | C1H87_RS04740 | Not Available | Positive | 1168653 - 1169669 | 38200.0 |
| shikimate dehydrogenase family protein | C1H87_RS04745 | Not Available | Positive | 1169666 - 1170403 | 27536.4 |
| duf349 domain-containing protein | C1H87_RS04750 | Not Available | Positive | 1170512 - 1172776 | 88074.3 |
| polymer-forming cytoskeletal protein | C1H87_RS04755 | Not Available | Positive | 1173023 - 1173421 | 14693.4 |
| nucleoside triphosphate pyrophosphohydrolase | C1H87_RS04760 | Not Available | Negative | 1173448 - 1174221 | 29907.4 |
| hypothetical protein | C1H87_RS23270 | Not Available | Positive | 1174431 - 1174583 | 6003.21 |
| c1 family peptidase | C1H87_RS04765 | Not Available | Positive | 1174592 - 1175491 | 34068.3 |
| aconitate hydratase | C1H87_RS04770 | Not Available | Negative | 1175635 - 1177902 | 82098.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
