Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylating nicotinate-nucleotide diphosphorylase | C1H87_RS04630 | Not Available | Negative | 1140757 - 1141617 | 32021.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C1H87_RS04635 | Not Available | Positive | 1141764 - 1142237 | 18327.4 |
| duf6520 family protein | C1H87_RS23710 | Not Available | Positive | 1142693 - 1142977 | 10480.8 |
| maue/doxx family redox-associated membrane protein | C1H87_RS04640 | Not Available | Positive | 1143219 - 1144814 | 60799.6 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS04645 | Not Available | Negative | 1145069 - 1146499 | 53878.6 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS04650 | Not Available | Negative | 1146518 - 1149781 | 122650.0 |
| hypothetical protein | C1H87_RS04655 | Not Available | Negative | 1150359 - 1150844 | 17624.9 |
| fecr family protein | C1H87_RS04660 | Not Available | Negative | 1150937 - 1152157 | 46861.9 |
| sigma-70 family rna polymerase sigma factor | C1H87_RS04665 | Not Available | Negative | 1152249 - 1152779 | 21145.6 |
| rna polymerase sigma-70 factor | C1H87_RS04670 | Not Available | Negative | 1153057 - 1153587 | 20907.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
