Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | C1H87_RS04430 | Not Available | Positive | 1073268 - 1074215 | 35169.6 |
| hu family dna-binding protein | C1H87_RS04435 | Not Available | Positive | 1074405 - 1074677 | 9524.54 |
| yqge/algh family protein | C1H87_RS04440 | Not Available | Positive | 1074799 - 1075359 | 21152.2 |
| aminotransferase class iv | C1H87_RS04445 | Not Available | Negative | 1075356 - 1076198 | 31944.9 |
| start-like domain-containing protein | C1H87_RS04450 | Not Available | Negative | 1076261 - 1076650 | 15172.6 |
| Trna-met | Not Available | Not Available | Positive | 1076783 - 1076856 | Not Available |
| hypothetical protein | C1H87_RS04460 | Not Available | Negative | 1076984 - 1077517 | 20265.2 |
| m48 family metalloprotease | C1H87_RS04465 | Not Available | Negative | 1077525 - 1079735 | 85032.5 |
| hypothetical protein | C1H87_RS04470 | Not Available | Negative | 1080171 - 1080380 | 8000.53 |
| alpha-l-fucosidase | C1H87_RS04475 | Not Available | Positive | 1080839 - 1082407 | 60148.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
