Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cryptochrome/photolyase family protein | C1H87_RS04380 | Not Available | Positive | 1062913 - 1064217 | 51676.8 |
| pa14 domain-containing protein | C1H87_RS04385 | Not Available | Positive | 1064562 - 1066058 | 56918.3 |
| hypothetical protein | C1H87_RS04390 | Not Available | Negative | 1066127 - 1066462 | 12410.0 |
| class i sam-dependent methyltransferase | C1H87_RS04395 | Not Available | Positive | 1066830 - 1067654 | 31556.7 |
| ktsc domain-containing protein | C1H87_RS04400 | Not Available | Positive | 1067862 - 1068086 | 9066.74 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | C1H87_RS04405 | Not Available | Negative | 1068145 - 1069455 | 47699.1 |
| duf4290 domain-containing protein | C1H87_RS04410 | Not Available | Negative | 1069465 - 1070106 | 25209.2 |
| duf493 family protein | C1H87_RS04415 | Not Available | Negative | 1070174 - 1070467 | 10983.0 |
| aaa family atpase | C1H87_RS04420 | Not Available | Positive | 1070826 - 1071365 | 20680.6 |
| atp-dependent dna helicase recq | C1H87_RS04425 | Not Available | Positive | 1071367 - 1073271 | 72393.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
