Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | C1H87_RS04235 | Not Available | Negative | 1035815 - 1036246 | 16045.7 |
| duf1801 domain-containing protein | C1H87_RS04240 | Not Available | Negative | 1036254 - 1036607 | 13605.6 |
| mate family efflux transporter | C1H87_RS04245 | Not Available | Negative | 1036614 - 1038020 | 50645.5 |
| had family hydrolase | C1H87_RS04250 | Not Available | Positive | 1038218 - 1038883 | 24890.4 |
| hypothetical protein | C1H87_RS23410 | Not Available | Negative | 1038877 - 1039038 | 6162.51 |
| cytochrome c biogenesis protein ccsa | C1H87_RS04255 | Not Available | Negative | 1039047 - 1042232 | 120253.0 |
| group iii truncated hemoglobin | C1H87_RS04260 | Not Available | Negative | 1042654 - 1043037 | 15129.0 |
| rossmann-like and duf2520 domain-containing protein | C1H87_RS04265 | Not Available | Positive | 1043334 - 1044101 | 28745.6 |
| kdsc family phosphatase | C1H87_RS04270 | Not Available | Positive | 1044082 - 1044612 | 19516.5 |
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | C1H87_RS04280 | Not Available | Positive | 1045202 - 1046119 | 34423.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
