Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | C1H87_RS04185 | Not Available | Positive | 1020715 - 1021032 | 11989.4 |
| m28 family peptidase | C1H87_RS04190 | Not Available | Positive | 1021192 - 1022244 | 40226.4 |
| m28 family metallopeptidase | C1H87_RS04195 | Not Available | Positive | 1022306 - 1023313 | 38278.2 |
| t9ss type a sorting domain-containing protein | C1H87_RS04200 | Not Available | Negative | 1023445 - 1028283 | 179043.0 |
| Trna-his | Not Available | Not Available | Positive | 1029059 - 1029134 | Not Available |
| bacillithiol biosynthesis deacetylase bshb1 | C1H87_RS04210 | Not Available | Negative | 1029252 - 1029971 | 26682.8 |
| slc13 family permease | C1H87_RS04215 | Not Available | Positive | 1030374 - 1032203 | 66025.5 |
| phosphoenolpyruvate carboxykinase (atp) | C1H87_RS04220 | Not Available | Positive | 1032241 - 1033863 | 60472.1 |
| duf2490 domain-containing protein | C1H87_RS04225 | Not Available | Positive | 1033980 - 1034663 | 26332.1 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | C1H87_RS04230 | Not Available | Negative | 1034895 - 1035815 | 35209.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
