Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cadherin repeat domain-containing protein | C1H87_RS04085 | Not Available | Positive | 1002613 - 1003716 | 39394.3 |
| sigma-70 family rna polymerase sigma factor | C1H87_RS04090 | Not Available | Positive | 1003797 - 1004318 | 20424.9 |
| sodium:solute symporter family protein | C1H87_RS04095 | Not Available | Negative | 1004533 - 1006347 | 66654.1 |
| Trna-leu | Not Available | Not Available | Positive | 1006600 - 1006684 | Not Available |
| paai family thioesterase | C1H87_RS04105 | Not Available | Positive | 1006817 - 1007263 | 16499.1 |
| sigma-70 family rna polymerase sigma factor | C1H87_RS04110 | Not Available | Positive | 1007346 - 1008176 | 31666.2 |
| fmn-dependent nadh-azoreductase | C1H87_RS04115 | Not Available | Positive | 1008445 - 1009062 | 23397.8 |
| cupin domain-containing protein | C1H87_RS04120 | Not Available | Positive | 1009066 - 1009581 | 19631.3 |
| tail fiber protein | C1H87_RS04125 | Not Available | Positive | 1009699 - 1010616 | 34473.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | C1H87_RS04130 | Not Available | Negative | 1010826 - 1011773 | 35857.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
