Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m16 family metallopeptidase | C1H87_RS04035 | Not Available | Negative | 987350 - 990142 | 106219.0 |
| protein-disulfide reductase dsbd domain-containing protein | C1H87_RS04040 | Not Available | Negative | 990298 - 990798 | 19047.2 |
| tlpa disulfide reductase family protein | C1H87_RS04045 | Not Available | Negative | 990800 - 991966 | 44359.9 |
| tlpa disulfide reductase family protein | C1H87_RS04050 | Not Available | Negative | 991986 - 993182 | 45313.1 |
| tlpa disulfide reductase family protein | C1H87_RS04055 | Not Available | Negative | 993234 - 994439 | 45788.9 |
| fecr family protein | C1H87_RS04060 | Not Available | Negative | 994449 - 995597 | 43594.0 |
| rna polymerase sigma factor | C1H87_RS04065 | Not Available | Negative | 995708 - 996250 | 21592.4 |
| fecr family protein | C1H87_RS04070 | Not Available | Positive | 996357 - 997481 | 42521.1 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS04075 | Not Available | Positive | 997572 - 1001165 | 134286.0 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS04080 | Not Available | Positive | 1001177 - 1002595 | 53579.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
