Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4998 domain-containing protein | C1H87_RS03985 | Not Available | Negative | 965284 - 966429 | 42754.4 |
| duf5000 domain-containing lipoprotein | C1H87_RS03990 | Not Available | Negative | 966485 - 967678 | 45324.1 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS03995 | Not Available | Negative | 967727 - 969613 | 72204.1 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS04000 | Not Available | Negative | 969635 - 972793 | 118450.0 |
| pkd domain-containing protein | C1H87_RS04005 | Not Available | Negative | 973584 - 981818 | 301111.0 |
| hypothetical protein | C1H87_RS04010 | Not Available | Negative | 981818 - 982588 | 29855.7 |
| lyttr family transcriptional regulator dna-binding domain-containing protein | C1H87_RS04015 | Not Available | Negative | 982933 - 983103 | 6870.51 |
| lytr/algr family response regulator transcription factor | C1H87_RS04020 | Not Available | Negative | 983178 - 983927 | 29117.5 |
| atp-binding protein | C1H87_RS04025 | Not Available | Negative | 983939 - 984343 | 15427.6 |
| histidine kinase | C1H87_RS04030 | Not Available | Negative | 984351 - 986930 | 101167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
