Flavivirga eckloniae str. ECD14

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavivirga

Description

Flavivirga eckloniae strain ECD14 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This organism thrives optimally at a temperature of 29°C, placing it within the mesophilic temperature range, which is conducive to its growth in moderate environmental conditions. Flavivirga eckloniae is distinguished by its genomic structure, possessing a single replicon, which is indicative of its genetic organization. Additionally, this strain is non-spore-forming, suggesting that it relies on other mechanisms to survive adverse conditions instead of forming spores, a trait common in some bacterial species. The accession number for Flavivirga eckloniae str. ECD14 is NZ_CP025791.1, which can be used to locate its genomic information in biological databases. From an ecological perspective, the characteristics of Flavivirga eckloniae str. ECD14 suggest it may play a role in various environments where aerobic conditions prevail, particularly those with moderate temperatures. Its non-motile nature may indicate a lifestyle that is influenced by its immediate surroundings, potentially leading to interactions with other microorganisms or substrates in its habitat. These traits collectively highlight the ecological niche that Flavivirga eckloniae occupies and its potential contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavivirga
SpeciesFlavivirga eckloniae
StrainECD14

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Ecklonia
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavivirga eckloniae strain ECD14 chromosome, complete genome.

Gene Summary

Adenine Count

1875697 bp

Thymine Count

1867130 bp

Guanine Count

959621 bp

Cytosine Count

962910 bp

Genome Length

5665358 bp

Protein-coding Genes

4573 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4998 domain-containing proteinC1H87_RS03985Not AvailableNegative965284 - 96642942754.4
duf5000 domain-containing lipoproteinC1H87_RS03990Not AvailableNegative966485 - 96767845324.1
ragb/susd family nutrient uptake outer membrane proteinC1H87_RS03995Not AvailableNegative967727 - 96961372204.1
susc/raga family tonb-linked outer membrane proteinC1H87_RS04000Not AvailableNegative969635 - 972793118450.0
pkd domain-containing proteinC1H87_RS04005Not AvailableNegative973584 - 981818301111.0
hypothetical proteinC1H87_RS04010Not AvailableNegative981818 - 98258829855.7
lyttr family transcriptional regulator dna-binding domain-containing proteinC1H87_RS04015Not AvailableNegative982933 - 9831036870.51
lytr/algr family response regulator transcription factorC1H87_RS04020Not AvailableNegative983178 - 98392729117.5
atp-binding proteinC1H87_RS04025Not AvailableNegative983939 - 98434315427.6
histidine kinaseC1H87_RS04030Not AvailableNegative984351 - 986930101167.0

Displaying genes 801 – 810 of 4631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.