Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endo-1,4-beta-xylanase | C1H87_RS03885 | Not Available | Negative | 915309 - 916676 | 50095.5 |
| carbohydrate binding domain-containing protein | C1H87_RS03890 | Not Available | Negative | 916689 - 917951 | 45347.4 |
| ragb/susd family nutrient uptake outer membrane protein | C1H87_RS03895 | Not Available | Negative | 918171 - 919658 | 55323.7 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS03900 | Not Available | Negative | 919668 - 922667 | 107752.0 |
| glycoside hydrolase family 3 protein | C1H87_RS03905 | Not Available | Negative | 922698 - 925367 | 99796.1 |
| hybrid sensor histidine kinase/response regulator transcription factor | C1H87_RS03910 | Not Available | Negative | 926067 - 930212 | 156756.0 |
| fructose-6-phosphate aldolase | C1H87_RS03915 | Not Available | Negative | 930287 - 930943 | 23228.2 |
| endonuclease/exonuclease/phosphatase family protein | C1H87_RS03920 | Not Available | Negative | 931332 - 932204 | 33373.8 |
| glycoside hydrolase family 97 protein | C1H87_RS03925 | Not Available | Negative | 932217 - 934319 | 80491.5 |
| sulfatase | C1H87_RS03930 | Not Available | Negative | 934309 - 935976 | 64243.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
