Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | C1H87_RS03835 | Not Available | Negative | 907147 - 908103 | 35193.8 |
| rna-binding s4 domain-containing protein | C1H87_RS03840 | Not Available | Positive | 908300 - 908671 | 14685.7 |
| phosphoribosyltransferase domain-containing protein | C1H87_RS03845 | Not Available | Positive | 908702 - 909205 | 18818.9 |
| shikimate kinase | C1H87_RS03850 | Not Available | Negative | 909197 - 909718 | 19686.9 |
| Trna-lys | Not Available | Not Available | Positive | 909867 - 909939 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 910125 - 910197 | Not Available |
| hypothetical protein | C1H87_RS03865 | Not Available | Positive | 910497 - 910835 | 12724.6 |
| hypothetical protein | C1H87_RS03870 | Not Available | Positive | 910896 - 911585 | 27439.2 |
| mfs transporter | C1H87_RS03875 | Not Available | Positive | 912199 - 913623 | 53173.0 |
| glycoside hydrolase family 43 protein | C1H87_RS03880 | Not Available | Positive | 913628 - 914650 | 38511.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
