Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 886697 - 886773 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 887025 - 887101 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 887265 - 888782 | Not Available |
| hypothetical protein | C1H87_RS03745 | Not Available | Negative | 888880 - 889134 | 9592.11 |
| threonine--trna ligase | C1H87_RS03750 | Not Available | Positive | 889853 - 891787 | 73325.2 |
| translation initiation factor if-3 | C1H87_RS03755 | Not Available | Positive | 891859 - 892368 | 19480.9 |
| 50s ribosomal protein l35 | C1H87_RS03760 | Not Available | Positive | 892509 - 892706 | 7559.6 |
| 50s ribosomal protein l20 | C1H87_RS03765 | Not Available | Positive | 892813 - 893157 | 13270.3 |
| t9ss type a sorting domain-containing protein | C1H87_RS03770 | Not Available | Negative | 893262 - 895448 | 75847.7 |
| helix-turn-helix domain-containing protein | C1H87_RS03775 | Not Available | Negative | 895556 - 896614 | 41881.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
