Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin-like peptidase domain-containing protein | C1H87_RS03630 | Not Available | Positive | 863295 - 864707 | 51367.2 |
| glyceraldehyde-3-phosphate dehydrogenase | C1H87_RS03635 | Not Available | Positive | 864848 - 866296 | 53667.5 |
| trna (guanine-n1)-methyltransferase | C1H87_RS03640 | Not Available | Positive | 866427 - 867047 | 23593.7 |
| hypothetical protein | C1H87_RS03645 | Not Available | Positive | 867408 - 867935 | 20611.5 |
| class i sam-dependent methyltransferase | C1H87_RS03650 | Not Available | Positive | 867919 - 868593 | 25328.4 |
| hypothetical protein | C1H87_RS03655 | Not Available | Positive | 868652 - 869329 | 26057.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | C1H87_RS03660 | Not Available | Positive | 869397 - 870074 | 25368.5 |
| hypothetical protein | C1H87_RS03665 | Not Available | Positive | 870088 - 870420 | 12039.2 |
| 50s ribosomal protein l19 | C1H87_RS03670 | Not Available | Positive | 870565 - 870915 | 13490.4 |
| nadp-dependent isocitrate dehydrogenase | C1H87_RS03675 | Not Available | Positive | 871776 - 873989 | 80745.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
