Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | C1H87_RS03230 | Not Available | Negative | 777874 - 778782 | 33582.3 |
| redox-regulated atpase ychf | C1H87_RS03235 | Not Available | Negative | 779314 - 780408 | 40030.6 |
| tonb-dependent receptor | C1H87_RS03240 | Not Available | Positive | 780651 - 783353 | 97101.0 |
| carboxypeptidase-like regulatory domain-containing protein | C1H87_RS03245 | Not Available | Positive | 783654 - 785129 | 56537.5 |
| hypothetical protein | C1H87_RS03250 | Not Available | Negative | 785177 - 787150 | 73847.2 |
| nuclear transport factor 2 family protein | C1H87_RS03255 | Not Available | Negative | 787378 - 787794 | 15935.1 |
| nad(p)-dependent oxidoreductase | C1H87_RS03260 | Not Available | Negative | 788239 - 788871 | 23689.3 |
| helix-turn-helix domain-containing protein | C1H87_RS03265 | Not Available | Negative | 789130 - 789918 | 30334.2 |
| class i sam-dependent methyltransferase | C1H87_RS03270 | Not Available | Negative | 790474 - 791112 | 24348.9 |
| m43 family zinc metalloprotease | C1H87_RS03275 | Not Available | Negative | 791115 - 792038 | 34917.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
