Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | C1H87_RS02975 | Not Available | Positive | 712620 - 713510 | 32168.3 |
| four helix bundle protein | C1H87_RS02980 | Not Available | Positive | 713666 - 714049 | 14954.6 |
| duf1015 domain-containing protein | C1H87_RS02985 | Not Available | Positive | 714143 - 715381 | 48064.0 |
| dinb family protein | C1H87_RS02990 | Not Available | Positive | 715430 - 715900 | 18375.9 |
| yggs family pyridoxal phosphate-dependent enzyme | C1H87_RS02995 | Not Available | Positive | 715914 - 716582 | 25071.4 |
| exonuclease domain-containing protein | C1H87_RS03000 | Not Available | Positive | 716715 - 718082 | 52097.8 |
| duf3857 domain-containing protein | C1H87_RS03005 | Not Available | Positive | 718082 - 720040 | 76263.6 |
| ion transporter | C1H87_RS03010 | Not Available | Positive | 720065 - 720913 | 31610.3 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | C1H87_RS03015 | Not Available | Positive | 720906 - 721829 | 34933.8 |
| gnat family n-acetyltransferase | C1H87_RS03020 | Not Available | Positive | 721816 - 722502 | 26377.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
