Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent metalloprotease | C1H87_RS00215 | Not Available | Negative | 54610 - 57213 | 98316.7 |
| nyn domain-containing protein | C1H87_RS00220 | Not Available | Positive | 57374 - 58102 | 27440.2 |
| hypothetical protein | C1H87_RS00225 | Not Available | Negative | 58262 - 59587 | 51735.7 |
| sdr family oxidoreductase | C1H87_RS00230 | Not Available | Positive | 59822 - 61249 | 54225.3 |
| hypothetical protein | C1H87_RS00235 | Not Available | Negative | 61448 - 62170 | 28729.4 |
| hypothetical protein | C1H87_RS00240 | Not Available | Negative | 62259 - 62705 | 16835.4 |
| duf3667 domain-containing protein | C1H87_RS00245 | Not Available | Positive | 63001 - 64077 | 41380.9 |
| excinuclease abc subunit uvra | C1H87_RS00250 | Not Available | Negative | 64777 - 67560 | 103442.0 |
| rna polymerase sigma factor | C1H87_RS00255 | Not Available | Positive | 67801 - 68385 | 22789.6 |
| endonuclease iii domain-containing protein | C1H87_RS00260 | Not Available | Negative | 68622 - 69281 | 25063.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
