Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | C1H87_RS02875 | Not Available | Negative | 693509 - 695875 | 87836.8 |
| hypothetical protein | C1H87_RS02880 | Not Available | Negative | 695927 - 696070 | 5259.45 |
| amidase | C1H87_RS02885 | Not Available | Negative | 696214 - 697668 | 53882.2 |
| helix-turn-helix domain-containing protein | C1H87_RS02890 | Not Available | Negative | 697902 - 699032 | 43319.9 |
| adenylate/guanylate cyclase domain-containing protein | C1H87_RS02895 | Not Available | Positive | 699183 - 700277 | 42335.2 |
| tyrosine-type recombinase/integrase | C1H87_RS02900 | Not Available | Negative | 700467 - 700649 | 6466.74 |
| duf6520 family protein | C1H87_RS02905 | Not Available | Negative | 700681 - 700977 | 11151.8 |
| dihydrolipoyl dehydrogenase | C1H87_RS02910 | Not Available | Negative | 701253 - 702653 | 50407.7 |
| s41 family peptidase | C1H87_RS02915 | Not Available | Negative | 702739 - 704319 | 61307.5 |
| ssra-binding protein smpb | C1H87_RS02920 | Not Available | Positive | 704649 - 705107 | 17881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
