Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1H87_RS02825 | Not Available | Negative | 682689 - 683237 | 20433.2 |
| sensor histidine kinase | C1H87_RS02830 | Not Available | Positive | 683758 - 684489 | 28119.8 |
| lytr/algr family response regulator transcription factor | C1H87_RS02835 | Not Available | Positive | 684490 - 685206 | 27469.4 |
| mechanosensitive ion channel family protein | C1H87_RS02840 | Not Available | Negative | 685304 - 686131 | 30641.8 |
| hypothetical protein | C1H87_RS02845 | Not Available | Negative | 686163 - 686348 | 7174.98 |
| rna polymerase sigma factor | C1H87_RS02850 | Not Available | Negative | 686345 - 686920 | 22342.8 |
| s41 family peptidase | C1H87_RS02855 | Not Available | Negative | 687262 - 688668 | 52213.9 |
| alpha-l-fucosidase | C1H87_RS02860 | Not Available | Positive | 688952 - 690520 | 59762.3 |
| hypothetical protein | C1H87_RS02865 | Not Available | Positive | 690769 - 692478 | 64922.2 |
| duf4249 domain-containing protein | C1H87_RS02870 | Not Available | Negative | 692659 - 693504 | 31548.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
