Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | C1H87_RS00165 | Not Available | Negative | 46086 - 46613 | 19966.7 |
| rsmd family rna methyltransferase | C1H87_RS00170 | Not Available | Negative | 46772 - 47311 | 20385.4 |
| duf3822 family protein | C1H87_RS00175 | Not Available | Negative | 47311 - 48132 | 31944.2 |
| hypothetical protein | C1H87_RS00180 | Not Available | Negative | 48116 - 48853 | 27596.8 |
| atp-dependent recd-like dna helicase | C1H87_RS00185 | Not Available | Positive | 48974 - 50401 | 54113.8 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | C1H87_RS00190 | Not Available | Positive | 50637 - 51365 | 27512.2 |
| had family hydrolase | C1H87_RS00195 | Not Available | Positive | 51411 - 52115 | 26545.7 |
| cata-like o-acetyltransferase | C1H87_RS00200 | Not Available | Positive | 52121 - 52738 | 23719.3 |
| iron-containing alcohol dehydrogenase family protein | C1H87_RS00205 | Not Available | Positive | 52790 - 53872 | 40417.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | C1H87_RS00210 | Not Available | Positive | 53874 - 54422 | 21487.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
