Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide oxidoreductase dcc family protein | C1H87_RS22885 | Not Available | Negative | 5575079 - 5575498 | 16172.8 |
| tetratricopeptide repeat protein | C1H87_RS22890 | Not Available | Negative | 5575516 - 5577393 | 72980.1 |
| thiol-activated cytolysin family protein | C1H87_RS22895 | Not Available | Positive | 5577713 - 5579248 | 56003.7 |
| endonuclease muts2 | C1H87_RS22900 | Not Available | Negative | 5579331 - 5581499 | 82817.5 |
| duf2911 domain-containing protein | C1H87_RS22905 | Not Available | Positive | 5581703 - 5582806 | 40787.4 |
| pp_04514 | C1H87_RS22910 | Not Available | Negative | 5582998 - 5583579 | Not Available |
| duf559 domain-containing protein | C1H87_RS22915 | Not Available | Negative | 5583627 - 5586173 | 97047.1 |
| t9ss type a sorting domain-containing protein | C1H87_RS22920 | Not Available | Negative | 5586328 - 5590275 | 145954.0 |
| m1 family metallopeptidase | C1H87_RS22925 | Not Available | Positive | 5590649 - 5592610 | 76215.1 |
| porp/sprf family type ix secretion system membrane protein | C1H87_RS22930 | Not Available | Negative | 5592614 - 5593615 | 38389.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
