Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1223 domain-containing protein | C1H87_RS22685 | Not Available | Positive | 5520069 - 5520797 | 27251.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | C1H87_RS22690 | Not Available | Negative | 5520792 - 5521499 | 26764.5 |
| hypothetical protein | C1H87_RS22695 | Not Available | Negative | 5521520 - 5521984 | 17840.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | C1H87_RS22700 | Not Available | Negative | 5522209 - 5523231 | 36845.4 |
| translocation/assembly module tamb domain-containing protein | C1H87_RS22705 | Not Available | Positive | 5523398 - 5527795 | 165387.0 |
| 6-phosphofructokinase | C1H87_RS22710 | Not Available | Positive | 5527953 - 5528939 | 35475.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | C1H87_RS22715 | Not Available | Positive | 5528959 - 5529960 | 35698.6 |
| n-acetylglucosamine kinase | C1H87_RS22720 | Not Available | Positive | 5530037 - 5530897 | 32439.9 |
| response regulator | C1H87_RS22725 | Not Available | Positive | 5531154 - 5532530 | 52072.2 |
| rida family protein | C1H87_RS22730 | Not Available | Negative | 5532568 - 5532948 | 13805.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
