Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | C1H87_RS22635 | Not Available | Negative | 5507843 - 5510269 | 90096.3 |
| tlpa disulfide reductase family protein | C1H87_RS22640 | Not Available | Positive | 5510421 - 5511632 | 45526.1 |
| hypothetical protein | C1H87_RS22645 | Not Available | Positive | 5511882 - 5514329 | 96064.8 |
| voc family protein | C1H87_RS22650 | Not Available | Negative | 5514333 - 5514713 | 14314.0 |
| helix-turn-helix domain-containing protein | C1H87_RS22655 | Not Available | Negative | 5514864 - 5515676 | 31537.1 |
| duf4269 domain-containing protein | C1H87_RS22660 | Not Available | Negative | 5515663 - 5516205 | 20934.3 |
| thump-like domain-containing protein | C1H87_RS22665 | Not Available | Negative | 5516400 - 5517581 | 44919.8 |
| ai-2e family transporter | C1H87_RS22670 | Not Available | Negative | 5517591 - 5518679 | 40364.9 |
| trmh family rna methyltransferase | C1H87_RS22675 | Not Available | Negative | 5518758 - 5519270 | 18953.9 |
| duf4159 domain-containing protein | C1H87_RS22680 | Not Available | Negative | 5519372 - 5519965 | 22316.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
