Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein porp/sprf | C1H87_RS22535 | Not Available | Positive | 5464739 - 5467738 | 107944.0 |
| t9ss type b sorting domain-containing protein | C1H87_RS22540 | Not Available | Positive | 5467822 - 5481699 | 484036.0 |
| type ix secretion system membrane protein porp/sprf | C1H87_RS22545 | Not Available | Positive | 5481715 - 5482716 | 38443.7 |
| m16 family metallopeptidase | C1H87_RS22550 | Not Available | Positive | 5483149 - 5485971 | 106228.0 |
| protein-disulfide reductase dsbd family protein | C1H87_RS22555 | Not Available | Positive | 5486137 - 5488233 | 76526.0 |
| aminotransferase class v-fold plp-dependent enzyme | C1H87_RS22560 | Not Available | Positive | 5488276 - 5489787 | 56798.0 |
| lysr family transcriptional regulator | C1H87_RS22565 | Not Available | Negative | 5489938 - 5490834 | 34842.5 |
| histidine ammonia-lyase | C1H87_RS22570 | Not Available | Positive | 5490916 - 5492409 | 54790.9 |
| urocanate hydratase | C1H87_RS22575 | Not Available | Positive | 5492417 - 5494414 | 74175.8 |
| imidazolonepropionase | C1H87_RS22580 | Not Available | Positive | 5494414 - 5495655 | 45086.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
