Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | C1H87_RS22285 | Not Available | Negative | 5411940 - 5412314 | 14488.1 |
| dinb family protein | C1H87_RS22290 | Not Available | Negative | 5412331 - 5412915 | 23139.1 |
| rep-associated tyrosine transposase | C1H87_RS22295 | Not Available | Negative | 5413031 - 5413615 | 22979.5 |
| hypothetical protein | C1H87_RS22300 | Not Available | Negative | 5413709 - 5414512 | 31422.7 |
| cobyric acid synthase | C1H87_RS22305 | Not Available | Positive | 5414873 - 5416336 | 54632.7 |
| pyridoxal phosphate-dependent aminotransferase | C1H87_RS22310 | Not Available | Positive | 5416330 - 5417337 | 37835.2 |
| adenosylcobinamide-phosphate synthase cbib | C1H87_RS22315 | Not Available | Positive | 5417328 - 5418260 | 34836.6 |
| aaa family atpase | C1H87_RS22320 | Not Available | Positive | 5418261 - 5418788 | 20545.2 |
| (2fe-2s) ferredoxin domain-containing protein | C1H87_RS22325 | Not Available | Positive | 5419087 - 5419884 | 30404.1 |
| uroporphyrinogen-iii c-methyltransferase | C1H87_RS23400 | Not Available | Positive | 5419884 - 5421428 | 57053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
