Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1H87_RS22085 | Not Available | Positive | 5354563 - 5356875 | 87586.8 |
| tim-barrel domain-containing protein | C1H87_RS22090 | Not Available | Positive | 5356885 - 5359455 | 98619.9 |
| alpha-l-fucosidase | C1H87_RS22095 | Not Available | Positive | 5359531 - 5361006 | 56782.0 |
| alpha-l-fucosidase | C1H87_RS22100 | Not Available | Positive | 5361178 - 5362743 | 60267.8 |
| rna polymerase sigma-70 factor | C1H87_RS22105 | Not Available | Positive | 5363814 - 5364344 | 20588.0 |
| fecr family protein | C1H87_RS22110 | Not Available | Positive | 5364425 - 5365612 | 45756.7 |
| susc/raga family tonb-linked outer membrane protein | C1H87_RS22115 | Not Available | Positive | 5365897 - 5369160 | 122989.0 |
| hypothetical protein | C1H87_RS22120 | Not Available | Positive | 5369473 - 5370543 | 41962.1 |
| helix-turn-helix transcriptional regulator | C1H87_RS22130 | Not Available | Negative | 5371052 - 5372608 | 61392.4 |
| sgnh/gdsl hydrolase family protein | C1H87_RS22135 | Not Available | Positive | 5372796 - 5374112 | 49071.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
