Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipocalin family protein | C1H87_RS21990 | Not Available | Positive | 5319015 - 5319986 | 36562.9 |
| t9ss type a sorting domain-containing protein | C1H87_RS21995 | Not Available | Positive | 5320023 - 5320862 | 30088.3 |
| lytr/algr family response regulator transcription factor | C1H87_RS22000 | Not Available | Positive | 5322604 - 5323416 | 32160.9 |
| hypothetical protein | C1H87_RS22005 | Not Available | Positive | 5324179 - 5324721 | 20333.3 |
| duf3440 domain-containing protein | C1H87_RS22010 | Not Available | Positive | 5324872 - 5326047 | 46578.7 |
| parb n-terminal domain-containing protein | C1H87_RS22015 | Not Available | Positive | 5326047 - 5326658 | 23540.0 |
| hypothetical protein | C1H87_RS22020 | Not Available | Positive | 5326851 - 5327927 | 41535.5 |
| gliding motility-associated c-terminal domain-containing protein | C1H87_RS22025 | Not Available | Negative | 5328170 - 5331301 | 109929.0 |
| leucine-rich repeat domain-containing protein | C1H87_RS22030 | Not Available | Negative | 5331654 - 5334212 | 93119.0 |
| tlpa family protein disulfide reductase | C1H87_RS23610 | Not Available | Negative | 5335205 - 5336734 | 58178.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
