Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate-binding protein | C1H87_RS21835 | Not Available | Positive | 5283742 - 5284869 | 42975.6 |
| hypothetical protein | C1H87_RS21840 | Not Available | Negative | 5284846 - 5285040 | 8094.94 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | C1H87_RS21845 | Not Available | Positive | 5285257 - 5287011 | 65914.7 |
| duf2853 family protein | C1H87_RS21850 | Not Available | Positive | 5287112 - 5287450 | 12566.9 |
| s1 rna-binding domain-containing protein | C1H87_RS21855 | Not Available | Positive | 5287715 - 5288545 | 31900.5 |
| hypothetical protein | C1H87_RS21860 | Not Available | Negative | 5288537 - 5288965 | 16293.4 |
| hypothetical protein | C1H87_RS21865 | Not Available | Negative | 5289383 - 5289811 | 16299.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C1H87_RS21870 | Not Available | Positive | 5290120 - 5291517 | 50989.0 |
| site-specific integrase | C1H87_RS21875 | Not Available | Positive | 5291697 - 5292812 | 43159.8 |
| hypothetical protein | C1H87_RS21880 | Not Available | Positive | 5292816 - 5293838 | 40712.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
